lab-pc 2 years ago
parent c2c081e0df
commit df9704e595
  1. 5
      constructor.py
  2. 6
      link_prediction.py
  3. 27
      load_data.py

@ -1,5 +1,7 @@
import tensorflow as tf
import numpy as np
from load_data import load_data_1
from model import GCN, Generator_z2g, Discriminator, D_graph
from optimizer import OptimizerAE, OptimizerCycle
import scipy.sparse as sp
@ -51,7 +53,8 @@ def get_model(model_str, placeholders, num_features, num_nodes, features_nonzero
def format_data(data_name):
# Load data
adj, features, y_test, tx, ty, test_maks, true_labels = load_data(data_name)
# adj, features, y_test, tx, ty, test_maks, true_labels = load_data(data_name)
adj, features, y_test, tx, ty, test_maks, true_labels = load_data_1("e")
# Store original adjacency matrix (without diagonal entries) for later
adj_orig = adj

@ -91,8 +91,7 @@ class Link_pred_Runner():
roc_curr, ap_curr, _ = lm_train.get_roc_score(emb, feas)
val_roc_score.append(roc_curr)
print("Epoch:", '%04d' % (epoch + 1),
"train_loss= {:.5f}, d_loss= {:.5f}, g_loss= {:.5f}, GD_loss= {:.5f}, GG_loss= {:.5f}".format(avg_cost[0], avg_cost[1], avg_cost[2], avg_cost[3],
avg_cost[4]), "val_roc=",
"train_loss= {:.5f}, d_loss= {:.5f}, g_loss= {:.5f}, GD_loss= {:.5f}, GG_loss= {:.5f}".format(avg_cost[0], avg_cost[1], avg_cost[2], avg_cost[3], avg_cost[4]), "val_roc=",
"{:.5f}".format(val_roc_score[-1]), "val_ap=", "{:.5f}".format(ap_curr))
if (epoch + 1) % 10 == 0:
@ -106,6 +105,5 @@ class Link_pred_Runner():
index = rec[:, 0].tolist().index(max(rec[:, 0].tolist()))
emb = record_emb[index]
ana = record[index]
scio.savemat('result/{}_link_64_64_new.mat'.format(self.data_name), {'embedded': emb,
'labels': feas['true_labels']})
# scio.savemat('result/{}_link_64_64_new.mat'.format(self.data_name), {'embedded': emb,'labels': feas['true_labels']})
print('The peak val_roc=%f, ap = %f' % (ana[0], ana[1]))

@ -0,0 +1,27 @@
import pickle
import numpy as np
import scipy.sparse as sp
def load_data_1(dataset):
adj = np.loadtxt('./data/partitioned_data/{}/orig/e_adj_orig.txt'.format(dataset), dtype=int)
adj = sp.csr_matrix(adj)
features = pickle.load(open("data/partitioned_data/e/feature/e_feature.pkl",'rb'))
y_test = 0
tx = 0
ty = 0
test_mask = 0
labels = 0
return adj, features, y_test, tx, ty, test_mask, labels
if __name__ == "__main__":
load_data_1('e')
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